|
Sign In to gain access to subscriptions and/or personal tools.
|
Microarray analysis of microRNA expression in peripheral blood cells of systemic lupus erythematosus patients
Y. Dai
The Second Clinical Medical College, Jinan University, Shenzhen People's Hospital, Guangdong Province, China
Y.-S. Huang
Key Laboratory of Laboratory Medical Diagnostics, Ministry of Education, Chongqing Medical University, Chongqing, China, hys{at}live.cn
M. Tang
Key Laboratory of Laboratory Medical Diagnostics, Ministry of Education, Chongqing Medical University, Chongqing, China
T.-Y. Lv
The Second Clinical Medical College, Jinan University, Shenzhen People's Hospital, Guangdong Province, China
C.-X. Hu
The Second Clinical Medical College, Jinan University, Shenzhen People's Hospital, Guangdong Province, China
Y.-H. Tan
The Second Clinical Medical College, Jinan University, Shenzhen People's Hospital, Guangdong Province, China
Z.-M. Xu
The Second Clinical Medical College, Jinan University, Shenzhen People's Hospital, Guangdong Province, China
Y.-B. Yin
Key Laboratory of Laboratory Medical Diagnostics, Ministry of Education, Chongqing Medical University, Chongqing, China
MicroRNAs (miRNAs) are noncoding RNA molecules of 21—24 nt that regulate the expression of target genes in a post-transcriptional manner. Evidence indicates that miRNAs play essential roles in embryogenesis, cell differentiation and pathogenesis of human diseases. This study describes a comparison between the miRNA profile of the systemic lupus erythematosus (SLE) patients and the controls to develop further understanding of the pathogenesis of SLE. Peripheral blood mononuclear cells were isolated from blood samples of 23 SLE patients, 10 idiopathic thrombocytopenic purpura patients and 10 healthy controls. The miRNA microarray chip analysis identified 16 miRNAs differentially expressed in SLE. The chip results were confirmed by northern blot analysis. This work indicates that miRNAs are potential diagnosis biomarkers and probable factors involved in the pathogenesis of SLE. Lupus (2007) 16, 936—946.
Key Words: human SLE microarray microRNA ITP
References
- Rekvig OP, Nossent JC Anti-double stranded DNA antibodies, nucleosomes, and systemic lupus erythematosus: a time for new paradigms? Arthritis Rheum 2003; 48: 300—312.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
- Yasutomo K., Horiuchi T., Kagami S. et al. Mutation of DNASE1 in people with systemic lupus erythematosus. Nature Genet 2001; 28: 313—314.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
- Zhang J., Roschke V., Baker KP et al. A role for B lumphocyte stimulator in systemic lupus erythematosus. J Immunol 2001; 166: 6—10.[Abstract/Free Full Text]
- Baechler EC, Batliwalla KM, Karypis G. et al. Interferon-inducible gene expression signature in peripheral blood cells of patients with severe lupus. Proc Natl Acad Sci 2003; 100: 2610—2615.[Abstract/Free Full Text]
- Bennett L., Palucka AK, Arce E. et al. Interferon and granulopoiesis signatures in systemic lupus erythematosus blood. J Exp Med 2003; 197: 711—723.[Abstract/Free Full Text]
- Crow MK, Wohlgemuth J. Microarray analysis of gene expression in lupus. Arthritis Res Ther 2003; 5: 279—287.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
- Mandel M., Gurevich M., Pauzner R., Kaminski N., Achiron A. Autoimmunity gene expression portrait: specific signature that intersects or differentiates between multiple sclerosis and systemic lupus erythematosus. Clin Exp Immunol 2004; 138: 164—170.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
- Crow MK, Kirou KA Interferon-alpha in systemic lupus erythematosus. Curr Opin Rheumatol 2004; 16: 541—547.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
- Kirou KA, Lee C., George S. et al. Coordinate overexpression of interferon-alpha-induced genes in systemic lupus erythematosus. Arthritis Rheum 2004; 50: 3958—3967.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
- Kirou KA, Lee C., George S. et al. Activation of the interferon-alpha pathway identifies a subgroup of systemic lupus erythematosus patients with distinct serologic features and active disease Arthritis Rheum 2005; 52: 1491—1503.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
- Xu L., Zhang L., Yi Y., Kang HK, Datta SK Human lupus T cells resist inactivation and escape death by upregulating COX-2. Nature Med 2004; 10: 411—415.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
- Qing X., Putterman C. Gene expression profiling in the study of the pathogenesis of systemic lupus erythematosus. Autoimmun Rev 2004; 3: 505—509.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
- Nath SK, Kilpatrick J., Harley JB Genetics of human systemic lupus erythematosus: the emerging picture. Curr Opin Immunol 2004; 16: 794—800.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
- Ishii T., Onda H., Tanigawa A. et al. Isolation and expression profiling of genes upregulated in the peripheral blood cells of systemic lupus erythematosus patients. DNA Res 2005; 12(6): 429—439.[Abstract/Free Full Text]
- Meister G., Tuschl T. Mechanisms of gene silencing by double-stranded RNA. Nature 2004; 431: 343—349.[CrossRef][Medline]
[Order article via Infotrieve]
- Bartel DP MicroRNAs: genomics, biogenesis, mechanism and function. Cell 2004; 116: 281—297.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
- Abbott AL, Alvarez-Saavedra E., Miska EA et al. The let-7 MicroRNA family members mir-48, mir-84, and mir-241 function together to regulate developmental timing in Caenorhabditis elegans. Dev Cell 2005; 9: 403—414.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
- Lee RC, Feinbaum RL, Ambros V. The C. elegans heterochronic gene lin-4 encodes small-RNAs with antisense complementarity to lin-14. Cell 1993; 75: 843—854.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
- Bernstein E., Kim SY, Carmell MA et al. Dicer is essential for mouse development. Nature Genet 2003; 35: 215—217.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
- Chen CZ, Li L., Lodish HF, Bartel DP MicroRNAs modulate hematopoietic lineage differentiation. Science 2004; 303: 83—86.[Abstract/Free Full Text]
- Lu J., Getz G., Miska EA et al. MicroRNA expression profiles classify human cancers. Nature 2005; 435: 834—838.[CrossRef][Medline]
[Order article via Infotrieve]
- Calin GA, Ferracin M., Cimmino A. et al. A MicroRNA signature associated with prognosis and progression in chronic lymphocytic leukemia. N Engl J Med 2005; 353: 1793—1801.[Abstract/Free Full Text]
- Johnson SM, Grosshans H., Shingara J. et al. RAS is regulated by the- let-7 microRNA family. Cell 2005; 120: 635—647.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
- Calin GA, Sevignani C., Dumitru CD et al. Human microRNA genes are frequently located at fragile sites and genomic regions involved in cancers. Proc Natl Acad Sci 2004; 101: 2999—3004.[Abstract/Free Full Text]
- Jin P., Alisch RS, Warren ST RNA and microRNAs in fragile X mental retardation. Nat Cell Biol 2004; 6: 1048—1053.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
- Mourelatos Z., Dostie J., Paushkin S., Sharma A., Charroux B. miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs. Genes Dev 2002: 16: 720—728.[Abstract/Free Full Text]
- Landthaler M., Yalcin A., Tuschl T. The human DiGeorge syndrome critical region gene 8 and its D. melanogaster homolog are required for miRNA biogenesis. Curr Biol 2004; 14: 2162—2167.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
- Gregory RI, Yan KP, Amuthan G. et al. The microprocessor complex mediates the genesis of microRNAs. Nature 2004; 432: 235—240.[CrossRef][Medline]
[Order article via Infotrieve]
- Poy MN, Eliasson L., Krutzfeldt J. et al. A pancreatic islet-specific microRNA regulates insulin secretion. Nature 2004; 432: 226—230.[CrossRef][Medline]
[Order article via Infotrieve]
- Hochberg MC Updating the American College of Rheumatology revised criteria for the classification of systemic lupus erythematosus. Arthritis Rheum 1997; 40: 1725.[Web of Science][Medline]
[Order article via Infotrieve]
- Bombardier C., Gladman DD, Urowitz MB, Caron D., Chang CH Derivation of the SLEDAI. A disease activity index for lupus patients. The Committee on Prognosis Studies in SLE. Arthritis Rheum 1992; 35: 630—640.
- Guzman J., Cardiel MH, Arce-Salinas A., Sanchez-Guerrero J., Alarcon-Segovia D. Measurement of disease activity in systemic lupus erythematosus. Prospective validation of 3 clinical indices. J Rheumatol 1992; 19: 1551—1558.[Web of Science][Medline]
[Order article via Infotrieve]
- Peng WT, Robinson MD, Mnaimneh S. et al. A panoramic view of yeast noncoding RNA processing. Cell 2003; 113: 919—933.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
- DeGregori J., Johnson DG Distinct and overlapping roles for E2F family members in transcription, proliferation and apoptosis. Curr Mol Med 2006; 6: 739—748.
- Azkargorta M., Arizmendi JM, Elortza F. et al. Differential proteome profiles in E2F2-deficient T lymphocytes. Proteomics 2006; 6(Suppl 1): S42—S50.[CrossRef][Medline]
[Order article via Infotrieve]
- Rajewsky N. MicroRNA target predictions in animals. Nat Genet 2006; 38(Suppl): S8—S13.[CrossRef][Medline]
[Order article via Infotrieve]
- Sarwal MM Chipping into the human genome: novel insights for transplantation. Immunol Rev 2006; 210: 138—155.[CrossRef][Web of Science][Medline]
[Order article via Infotrieve]
Lupus, Vol. 16, No. 12,
939-946 (2007)
DOI: 10.1177/0961203307084158

CiteULike Complore Connotea Del.icio.us Digg Reddit Technorati Twitter What's this?
This article has been cited by other articles:

|
 |

|
 |
 
G. D. Sebastiani and M. Galeazzi
Infection--genetics relationship in systemic lupus erythematosus
Lupus,
November 1, 2009;
18(13):
1169 - 1175.
[Abstract]
[PDF]
|
 |
|

|
 |

|
 |
 
F J Sheedy and L A J O'Neill
Adding fuel to fire: microRNAs as a new class of mediators of inflammation
Ann Rheum Dis,
December 1, 2008;
67(Suppl_3):
iii50 - iii55.
[Abstract]
[Full Text]
[PDF]
|
 |
|
|
|